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 BL-SOM result
Position of SOM areas by tissue specificity of gene expression and metabolite accumulation. 0 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29
0 40 12 8 12 7 14 19 12 4 16 15 8 18 9 19 9 5 18 10 11 19 13 12 10 13 11 20 25 25 25
1 9 22 2 8 3 7 4 10 6 8 5 5 9 7 7 12 7 11 8 9 3 14 7 14 17 5 11 7 4 21
2 14 13 19 10 12 9 14 7 16 5 4 5 10 15 24 21 15 18 9 11 13 14 17 16 10 8 10 16 9 18
3 11 10 12 15 13 7 10 13 18 22 29 18 14 25 14 12 14 14 17 15 16 6 9 15 8 7 19 16 9 12
4 9 11 15 13 17 17 14 14 14 30 14 33 34 27 18 23 14 16 16 9 24 12 20 15 12 11 13 25 10 14
5 13 12 15 21 10 9 22 24 13 29 18 27 25 28 19 21 15 18 17 17 9 10 16 13 4 25 7 19 12 7
6 16 15 21 20 18 26 15 25 20 25 14 30 21 25 25 28 17 20 10 9 18 22 13 20 5 8 5 15 8 21
7 16 13 27 25 20 19 22 20 20 12 26 25 21 20 24 15 10 21 17 18 12 15 5 8 9 14 14 19 5 9
8 11 14 22 19 17 16 26 21 19 20 26 22 11 23 25 17 24 16 12 12 22 14 13 17 12 14 19 17 10 11
9 20 9 13 20 12 25 22 17 14 22 21 19 20 10 24 11 21 14 19 18 15 6 13 19 11 18 17 18 4 22
10 34 22 7 19 19 16 20 25 20 18 24 33 20 23 19 13 24 23 21 15 21 21 18 13 10 16 13 20 13 8
11 11 9 12 13 28 14 19 18 17 18 15 16 24 16 12 15 25 17 20 17 27 23 16 15 15 17 19 21 10 23
12 17 17 11 16 9 21 19 21 26 18 21 14 27 11 18 10 11 19 14 26 18 21 18 22 23 17 19 16 9 16
13 16 6 15 13 15 18 16 21 28 14 19 21 14 17 14 11 34 14 23 18 12 20 33 13 11 12 23 21 16 16
14 32 5 10 15 20 13 16 27 24 12 16 6 21 16 19 15 25 22 20 14 23 15 27 56 21 19 22 23 14 17
15 3 14 15 13 11 7 19 15 21 8 17 14 20 15 20 22 17 19 25 21 13 19 15 12 13 20 9 23 13 24
16 10 9 6 6 10 17 7 15 22 19 19 13 10 17 8 24 10 21 13 15 10 12 15 22 24 23 15 28 11 25
17 20 18 18 12 7 11 11 20 8 10 15 20 7 27 7 20 21 16 15 19 15 15 19 31 16 19 19 23 11 17
18 10 7 9 19 13 35 8 8 18 17 16 13 17 10 1 10 19 19 11 9 14 18 15 29 15 25 9 23 13 13
19 15 10 15 16 23 10 14 17 5 12 17 13 11 4 11 16 20 10 10 17 15 19 10 9 9 17 13 18 6 28
20 8 13 22 21 24 7 17 5 15 22 11 9 30 9 13 11 20 10 12 11 7 15 4 28 12 18 9 18 10 12
21 30 23 9 23 14 10 22 15 23 17 29 35 18 38 36 27 11 5 15 20 10 13 6 11 8 11 12 10 9 19
22 1 2 10 10 14 14 16 19 22 29 22 38 20 27 16 12 7 22 4 5 6 22 6 22 5 17 8 15 6 15
23 27 12 37 21 13 11 18 16 20 23 13 19 7 5 3 4 9 19 1 22 17 14 7 13 14 10 12 9 12 14
24 14 13 13 14 10 18 16 19 8 7 22 8 23 14 8 3 16 11 1 9 9 12 6 3 13 4 11 8 6 9
25 28 18 32 17 17 17 23 28 16 9 31 6 20 10 28 7 43 10 12 17 16 7 25 9 24 10 18 11 8 20
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Polarity
Query M/Z
m/z tolerance ±
AtMetExpress peak IDs
MS2T IDs
ReSpect accessions

Choosing cell X:" 9 " Y:" 18 "

1. Metabolite information

No. AtMetExp ID Polality MS2T ID ReSpect
Accession Score Description
1 adn013254 LinkIcon Negative - - -
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2 adn029785 LinkIcon Negative ATH06n03114 LinkIcon - -
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ATH06n03645 LinkIcon - -
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ATH07n03449 LinkIcon - -
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ATH07n04326 LinkIcon - -
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ATH08n05946 LinkIcon - -
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ATH08n06521 LinkIcon - -
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ATH09n06025 LinkIcon - -
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ATH10n04534 LinkIcon - -
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ATH11n02811 LinkIcon - -
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ATH11n03275 LinkIcon - -
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ATH12n02585 LinkIcon - -
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ATH12n03006 LinkIcon - -
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ATH13n05093 LinkIcon - -
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ATH13n05945 LinkIcon - -
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ATH14n05106 LinkIcon - -
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ATH14n05349 LinkIcon - -
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ATH14n05658 LinkIcon - -
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ATH14n05899 LinkIcon - -
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ATH56n06794 LinkIcon - -
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ATH56n07540 LinkIcon - -
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ATH57n07087 LinkIcon - -
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ATH57n07328 LinkIcon - -
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ATH57n07813 LinkIcon - -
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ATH58n06887 LinkIcon - -
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ATH58n06890 LinkIcon - -
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ATH58n07655 LinkIcon - -
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ATH59n07009 LinkIcon - -
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ATH60n06669 LinkIcon - -
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ATH60n07399 LinkIcon - -
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ATH61n06014 LinkIcon - -
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ATH61n06288 LinkIcon - -
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ATH61n06690 LinkIcon - -
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ATH61n06693 LinkIcon - -
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ATH62n06301 LinkIcon - -
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ATH62n06305 LinkIcon - -
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ATH62n06991 LinkIcon - -
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ATH62n06995 LinkIcon - -
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ATH63n06134 LinkIcon - -
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ATH63n06881 LinkIcon - -
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ATH64n06427 LinkIcon - -
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ATH64n06430 LinkIcon - -
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ATH64n07630 LinkIcon - -
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3 adp007573 LinkIcon Positive ATH06p04590 LinkIcon - -
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ATH07p03913 LinkIcon - -
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ATH08p04125 LinkIcon - -
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ATH08p04624 LinkIcon - -
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ATH09p04075 LinkIcon - -
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ATH12p03917 LinkIcon - -
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ATH13p04402 LinkIcon - -
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ATH13p04900 LinkIcon - -
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ATH13p05136 LinkIcon - -
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ATH57p04438 LinkIcon - -
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ATH58p04239 LinkIcon - -
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ATH59p03840 LinkIcon - -
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ATH59p04545 LinkIcon - -
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ATH63p03834 LinkIcon - -
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ATH63p04481 LinkIcon - -
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ATH63p04532 LinkIcon - -
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ATH63p04804 LinkIcon - -
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2. Gene information

No. ID Short description Curator summary Computational description
1
at1g20350
translocase inner membrane subunit 17-1 mitochondrial inner membrane translocase translocase inner membrane subunit 17-1 (TIM17-1); FUNCTIONS IN: protein transporter activity, P-P-bond-hydrolysis-driven protein transmembrane transporter activity; INVOLVED IN: protein transport; LOCATED IN: mitochondrial inner membrane presequence translocase complex; EXPRESSED IN: 11 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: Mitochondrial inner membrane translocase complex, subunit Tim17/22 (InterPro:IPR003397); BEST Arabidopsis thaliana protein match is: translocase inner membrane subunit 17-2 (TAIR:AT2G37410.2); Has 784 Blast hits to 781 proteins in 207 species: Archae - 0; Bacteria - 0; Metazoa - 333; Fungi - 216; Plants - 165; Viruses - 0; Other Eukaryotes - 70 (source: NCBI BLink).
2
at1g33720
cytochrome P450, family 76, subfamily C, polypeptide 6 member of CYP76C "cytochrome P450, family 76, subfamily C, polypeptide 6" (CYP76C6); FUNCTIONS IN: electron carrier activity, monooxygenase activity, iron ion binding, oxygen binding, heme binding; INVOLVED IN: oxidation reduction; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, E-class, group I (InterPro:IPR002401), Cytochrome P450, conserved site (InterPro:IPR017972); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 76, subfamily C, polypeptide 4 (TAIR:AT2G45550.1); Has 33801 Blast hits to 33558 proteins in 1715 species: Archae - 57; Bacteria - 3803; Metazoa - 12084; Fungi - 7174; Plants - 9448; Viruses - 6; Other Eukaryotes - 1229 (source: NCBI BLink).
3
at1g33730
cytochrome P450, family 76, subfamily C, polypeptide 5 member of CYP76C "cytochrome P450, family 76, subfamily C, polypeptide 5" (CYP76C5); FUNCTIONS IN: electron carrier activity, monooxygenase activity, iron ion binding, oxygen binding, heme binding; INVOLVED IN: oxidation reduction; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, conserved site (InterPro:IPR017972), Cytochrome P450, E-class, group I (InterPro:IPR002401); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 76, subfamily C, polypeptide 6 (TAIR:AT1G33720.1); Has 33978 Blast hits to 33882 proteins in 1749 species: Archae - 58; Bacteria - 4507; Metazoa - 11569; Fungi - 7344; Plants - 9104; Viruses - 6; Other Eukaryotes - 1390 (source: NCBI BLink).
4
at2g39030
Acyl-CoA N-acyltransferases (NAT) superfamily protein - Acyl-CoA N-acyltransferases (NAT) superfamily protein; FUNCTIONS IN: N-acetyltransferase activity; INVOLVED IN: metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 13 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: GCN5-related N-acetyltransferase, C-terminal (InterPro:IPR022610), GCN5-related N-acetyltransferase (InterPro:IPR000182), Acyl-CoA N-acyltransferase (InterPro:IPR016181); BEST Arabidopsis thaliana protein match is: Acyl-CoA N-acyltransferases (NAT) superfamily protein (TAIR:AT2G39020.1); Has 1996 Blast hits to 1996 proteins in 707 species: Archae - 30; Bacteria - 1221; Metazoa - 280; Fungi - 96; Plants - 60; Viruses - 0; Other Eukaryotes - 309 (source: NCBI BLink).
5
at3g44350
NAC domain containing protein 61 - NAC domain containing protein 61 (NAC061); CONTAINS InterPro DOMAIN/s: No apical meristem (NAM) protein (InterPro:IPR003441); BEST Arabidopsis thaliana protein match is: NAC domain containing protein 90 (TAIR:AT5G22380.1); Has 2643 Blast hits to 2638 proteins in 75 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 2643; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
6
at3g44860
farnesoic acid carboxyl-O-methyltransferase Encodes a farnesoic acid carboxyl-O-methyltransferase. farnesoic acid carboxyl-O-methyltransferase (FAMT); FUNCTIONS IN: S-adenosylmethionine-dependent methyltransferase activity, farnesoic acid O-methyltransferase activity; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: leaf; EXPRESSED DURING: seedling growth; CONTAINS InterPro DOMAIN/s: SAM dependent carboxyl methyltransferase (InterPro:IPR005299); BEST Arabidopsis thaliana protein match is: S-adenosyl-L-methionine-dependent methyltransferases superfamily protein (TAIR:AT3G44870.1); Has 885 Blast hits to 875 proteins in 112 species: Archae - 0; Bacteria - 44; Metazoa - 9; Fungi - 5; Plants - 718; Viruses - 0; Other Eukaryotes - 109 (source: NCBI BLink).
7
at3g44870
S-adenosyl-L-methionine-dependent methyltransferases superfamily protein - S-adenosyl-L-methionine-dependent methyltransferases superfamily protein; FUNCTIONS IN: S-adenosylmethionine-dependent methyltransferase activity, methyltransferase activity; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: SAM dependent carboxyl methyltransferase (InterPro:IPR005299); BEST Arabidopsis thaliana protein match is: farnesoic acid carboxyl-O-methyltransferase (TAIR:AT3G44860.1); Has 896 Blast hits to 886 proteins in 115 species: Archae - 0; Bacteria - 49; Metazoa - 9; Fungi - 5; Plants - 720; Viruses - 0; Other Eukaryotes - 113 (source: NCBI BLink).
8
at4g08870
Arginase/deacetylase superfamily protein Encodes one of the two arginase in the genome. Gene expression is enhanced by methyl jasmonate treatment. Arginase/deacetylase superfamily protein; FUNCTIONS IN: arginase activity, cobalt ion binding, agmatinase activity; INVOLVED IN: response to jasmonic acid stimulus, polyamine metabolic process; LOCATED IN: mitochondrion, chloroplast; EXPRESSED IN: sepal vascular system, cotyledon vascular system, root vascular system, style, leaf; EXPRESSED DURING: seedling growth; CONTAINS InterPro DOMAIN/s: Ureohydrolase (InterPro:IPR006035); BEST Arabidopsis thaliana protein match is: arginase (TAIR:AT4G08900.1); Has 8845 Blast hits to 8843 proteins in 1673 species: Archae - 297; Bacteria - 4692; Metazoa - 410; Fungi - 370; Plants - 72; Viruses - 0; Other Eukaryotes - 3004 (source: NCBI BLink).
9
at4g08900
arginase Encodes an arginase, likely to be involved in polyamine biosynthesis in pollen. arginase; FUNCTIONS IN: arginase activity, cobalt ion binding, agmatinase activity; INVOLVED IN: defense response to bacterium, arginine catabolic process, polyamine metabolic process; LOCATED IN: chloroplast; EXPRESSED IN: 8 plant structures; CONTAINS InterPro DOMAIN/s: Ureohydrolase (InterPro:IPR006035), Ureohydrolase, manganese-binding site (InterPro:IPR020855); BEST Arabidopsis thaliana protein match is: Arginase/deacetylase superfamily protein (TAIR:AT4G08870.1); Has 9226 Blast hits to 9224 proteins in 1712 species: Archae - 292; Bacteria - 4928; Metazoa - 419; Fungi - 376; Plants - 74; Viruses - 0; Other Eukaryotes - 3137 (source: NCBI BLink).
10
at4g23220
cysteine-rich RLK (RECEPTOR-like protein kinase) 14 Encodes a cysteine-rich receptor-like protein kinase. cysteine-rich RLK (RECEPTOR-like protein kinase) 14 (CRK14); FUNCTIONS IN: kinase activity; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase domain (InterPro:IPR002290), Protein of unknown function DUF26 (InterPro:IPR002902), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase-like domain (InterPro:IPR011009), Protein kinase, catalytic domain (InterPro:IPR000719), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: cysteine-rich RLK (RECEPTOR-like protein kinase) 12 (TAIR:AT4G23200.1); Has 123017 Blast hits to 121427 proteins in 4536 species: Archae - 96; Bacteria - 13930; Metazoa - 45424; Fungi - 10107; Plants - 35087; Viruses - 455; Other Eukaryotes - 17918 (source: NCBI BLink).
11
at4g23600
Tyrosine transaminase family protein Encodes cystine lyase which is expected to be involved in amino acid metabolism, providing the plant with cysteine and the generation of precursors of ethylene biosynthesis. mRNA levels are elevated in response to wounding. CORONATINE INDUCED 1 (CORI3); FUNCTIONS IN: cystathionine beta-lyase activity, transaminase activity; INVOLVED IN: in 8 processes; LOCATED IN: apoplast, vacuole; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: 1-aminocyclopropane-1-carboxylate synthase (InterPro:IPR001176), Pyridoxal phosphate-dependent transferase, major domain (InterPro:IPR015424), Aminotransferase, class I/classII (InterPro:IPR004839), Tyrosine transaminase (InterPro:IPR021178), Tyrosine/nicotianamine aminotransferase (InterPro:IPR005958), Pyridoxal phosphate-dependent transferase, major region, subdomain 1 (InterPro:IPR015421); BEST Arabidopsis thaliana protein match is: Tyrosine transaminase family protein (TAIR:AT4G23590.1); Has 36474 Blast hits to 36468 proteins in 2971 species: Archae - 924; Bacteria - 25970; Metazoa - 732; Fungi - 654; Plants - 1240; Viruses - 0; Other Eukaryotes - 6954 (source: NCBI BLink).
12
at5g41740
Disease resistance protein (TIR-NBS-LRR class) family - Disease resistance protein (TIR-NBS-LRR class) family; FUNCTIONS IN: transmembrane receptor activity, nucleoside-triphosphatase activity, nucleotide binding, ATP binding; INVOLVED IN: signal transduction, apoptosis, defense response, innate immune response; LOCATED IN: intrinsic to membrane, chloroplast; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), NB-ARC (InterPro:IPR002182), Leucine-rich repeat (InterPro:IPR001611), Disease resistance protein (InterPro:IPR000767), Toll-Interleukin receptor (InterPro:IPR000157); BEST Arabidopsis thaliana protein match is: Disease resistance protein (TIR-NBS-LRR class) family (TAIR:AT5G41750.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
13
at5g41750
Disease resistance protein (TIR-NBS-LRR class) family - Disease resistance protein (TIR-NBS-LRR class) family; FUNCTIONS IN: transmembrane receptor activity, nucleoside-triphosphatase activity, nucleotide binding, ATP binding; INVOLVED IN: signal transduction, defense response, apoptosis, innate immune response; LOCATED IN: intrinsic to membrane; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), NB-ARC (InterPro:IPR002182), Toll-Interleukin receptor (InterPro:IPR000157), Disease resistance protein (InterPro:IPR000767); BEST Arabidopsis thaliana protein match is: Disease resistance protein (TIR-NBS-LRR class) family (TAIR:AT5G41740.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
14
at5g48850
Tetratricopeptide repeat (TPR)-like superfamily protein homologous to the wheat sulphate deficiency-induced gene sdi1. Expression in root and leaf is induced by sulfur starvation. Knockout mutants retained higher root and leaf sulfate concentrations, indicating a role in regulation of stored sulfate pools. SULPHUR DEFICIENCY-INDUCED 1 (ATSDI1); FUNCTIONS IN: binding; INVOLVED IN: cellular response to sulfur starvation, regulation of sulfur utilization; LOCATED IN: cellular_component unknown; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Tetratricopeptide-like helical (InterPro:IPR011990), Tetratricopeptide repeat-containing (InterPro:IPR013026), Tetratricopeptide repeat (InterPro:IPR019734); BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT1G04770.1); Has 255 Blast hits to 246 proteins in 34 species: Archae - 2; Bacteria - 37; Metazoa - 0; Fungi - 0; Plants - 177; Viruses - 0; Other Eukaryotes - 39 (source: NCBI BLink).

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Integrated Genome Informatics Research Unit